Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.5□□□□□ -0.41
Rnf8Q8VC56 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Gm12490-201ENSMUST00000120255 560 ntBASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.49□□□□□ -0.41
Rnf8Q8VC56 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf8Q8VC56 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm11918-201ENSMUST00000121660 179 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm23984-201ENSMUST00000157139 203 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm9002-201ENSMUST00000178437 499 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm38144-201ENSMUST00000192790 465 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm38223-201ENSMUST00000194484 695 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm17330-201ENSMUST00000221047 165 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf8Q8VC56 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf8Q8VC56 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf8Q8VC56 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms