Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Gm12384-201ENSMUST00000119228 919 ntBASIC14.17□□□□□ -0.14
Rpap2Q8VC34 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Gm40466-201ENSMUST00000212174 422 ntBASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpap2Q8VC34 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Gm13829-201ENSMUST00000119600 138 ntBASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Gm23363-201ENSMUST00000175024 79 ntBASIC14.16□□□□□ -0.14
Rpap2Q8VC34 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms