Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Gm5866-201ENSMUST00000177881 973 ntBASIC12.95□□□□□ -0.34
Vps39Q8R5L3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps39Q8R5L3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Gm45668-201ENSMUST00000211271 493 ntBASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps39Q8R5L3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Gm12928-201ENSMUST00000117115 573 ntBASIC12.93□□□□□ -0.34
Vps39Q8R5L3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms