Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cd109Q8R422 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cd109Q8R422 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cd109Q8R422 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC18.15■□□□□ 0.5
Cd109Q8R422 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC18.15■□□□□ 0.5
Cd109Q8R422 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC18.15■□□□□ 0.5
Cd109Q8R422 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC18.15■□□□□ 0.5
Cd109Q8R422 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd109Q8R422 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd109Q8R422 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd109Q8R422 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd109Q8R422 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd109Q8R422 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd109Q8R422 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Gm14644-201ENSMUST00000116671 647 ntBASIC18.14■□□□□ 0.49
Cd109Q8R422 Gm37986-201ENSMUST00000193285 383 ntBASIC18.14■□□□□ 0.49
Cd109Q8R422 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cd109Q8R422 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd109Q8R422 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Gm5884-201ENSMUST00000036712 1479 ntBASIC18.13■□□□□ 0.49
Cd109Q8R422 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC18.13■□□□□ 0.49
Cd109Q8R422 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd109Q8R422 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Cd109Q8R422 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC18.12■□□□□ 0.49
Cd109Q8R422 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC18.12■□□□□ 0.49
Cd109Q8R422 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Cd109Q8R422 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC18.12■□□□□ 0.49
Cd109Q8R422 Gm27552-201ENSMUST00000183351 62 ntBASIC18.12■□□□□ 0.49
Cd109Q8R422 Gm27844-201ENSMUST00000183613 62 ntBASIC18.12■□□□□ 0.49
Cd109Q8R422 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC18.12■□□□□ 0.49
Cd109Q8R422 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Gm45779-201ENSMUST00000212189 4064 ntBASIC18.12■□□□□ 0.49
Cd109Q8R422 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC18.12■□□□□ 0.49
Cd109Q8R422 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd109Q8R422 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cd109Q8R422 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd109Q8R422 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd109Q8R422 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms