Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Sf3a1Q8K4Z5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Gm18062-201ENSMUST00000208020 547 ntBASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Gm18055-201ENSMUST00000208254 547 ntBASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3a1Q8K4Z5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Gm19163-201ENSMUST00000223313 780 ntBASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3a1Q8K4Z5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms