Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Gm26448-201ENSMUST00000082446 203 ntBASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col23a1Q8K4G2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Gm13809-201ENSMUST00000117921 597 ntBASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Gm11451-201ENSMUST00000118946 630 ntBASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Gm8199-201ENSMUST00000121323 823 ntBASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Gm22144-201ENSMUST00000157402 102 ntBASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Gm23771-201ENSMUST00000178702 110 ntBASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col23a1Q8K4G2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Gm11956-201ENSMUST00000119525 512 ntBASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Gm8100-201ENSMUST00000182906 988 ntBASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Gm27910-201ENSMUST00000185004 107 ntBASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col23a1Q8K4G2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col23a1Q8K4G2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms