Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfwd3Q8CIK8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm4984-201ENSMUST00000115987 360 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm12390-201ENSMUST00000117897 397 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm12203-201ENSMUST00000118235 598 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm12209-201ENSMUST00000120089 596 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm37497-201ENSMUST00000195830 798 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm43433-201ENSMUST00000196573 481 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm19931-201ENSMUST00000198920 368 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.17□□□□□ -0.46
Rfwd3Q8CIK8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Gm14127-201ENSMUST00000117906 678 ntBASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Gm27331-201ENSMUST00000183705 60 ntBASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Gm29127-201ENSMUST00000188304 517 ntBASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Gm43438-201ENSMUST00000198133 379 ntBASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms