Protein–RNA interactions for Protein: Q8CFI2

Cdc34, Ubiquitin-conjugating enzyme E2 R1, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc34Q8CFI2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdc34Q8CFI2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cdc34Q8CFI2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdc34Q8CFI2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cdc34Q8CFI2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdc34Q8CFI2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdc34Q8CFI2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.38□□□□□ -0.75
Cdc34Q8CFI2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cdc34Q8CFI2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Mir3113-201ENSMUST00000175478 76 ntBASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdc34Q8CFI2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm11745-201ENSMUST00000121669 448 ntBASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm18766-201ENSMUST00000189811 808 ntBASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc34Q8CFI2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms