Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.63□□□□□ -0.23
Ccdc28aQ8CEI3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Gm27838-201ENSMUST00000184829 128 ntBASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28aQ8CEI3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gm11978-201ENSMUST00000122315 466 ntBASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gm27989-201ENSMUST00000184721 107 ntBASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gm28760-201ENSMUST00000185995 736 ntBASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gm37935-201ENSMUST00000192012 982 ntBASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.61□□□□□ -0.23
Ccdc28aQ8CEI3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms