Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fam228aQ8CDW1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fam228aQ8CDW1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fam228aQ8CDW1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.57□□□□□ -0.24
Fam228aQ8CDW1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fam228aQ8CDW1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fam228aQ8CDW1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fam228aQ8CDW1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.57□□□□□ -0.24
Fam228aQ8CDW1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Gm21854-201ENSMUST00000179901 471 ntBASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Gm26315-201ENSMUST00000083890 321 ntBASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Fam228aQ8CDW1 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fam228aQ8CDW1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fam228aQ8CDW1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fam228aQ8CDW1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fam228aQ8CDW1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fam228aQ8CDW1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms