Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Gm18018-201ENSMUST00000198273 408 ntBASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Gm9794-201ENSMUST00000202370 423 ntBASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lrif1Q8CDD9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Gm37917-201ENSMUST00000194711 392 ntBASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Lrif1Q8CDD9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms