Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim9Q8C7M3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Gm26185-201ENSMUST00000157692 266 ntBASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Gm17208-201ENSMUST00000168388 535 ntBASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Gm7029-201ENSMUST00000173226 450 ntBASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim9Q8C7M3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Gm29649-201ENSMUST00000185649 419 ntBASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim9Q8C7M3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.23□□□□□ -0.13
Trim9Q8C7M3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Gm14921-201ENSMUST00000118643 908 ntBASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Gm11424-201ENSMUST00000121929 829 ntBASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Gm12363-201ENSMUST00000122250 668 ntBASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Gm29127-201ENSMUST00000188304 517 ntBASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms