Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Gm27989-201ENSMUST00000184721 107 ntBASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Gm9063-201ENSMUST00000223299 582 ntBASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tsen54Q8C2A2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm12428-201ENSMUST00000119844 727 ntBASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Mir8102-201ENSMUST00000184148 139 ntBASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm27321-201ENSMUST00000185021 205 ntBASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm9229-201ENSMUST00000222777 126 ntBASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tsen54Q8C2A2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tsen54Q8C2A2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tsen54Q8C2A2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tsen54Q8C2A2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tsen54Q8C2A2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.82□□□□□ -0.68
Tsen54Q8C2A2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tsen54Q8C2A2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms