Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Gm2495-201ENSMUST00000191160 466 ntBASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Gm38144-201ENSMUST00000192790 465 ntBASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Gm18187-201ENSMUST00000196476 984 ntBASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.68□□□□□ -0.22
Trerf1Q8BXJ2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Gm15371-201ENSMUST00000117057 784 ntBASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Gm6983-201ENSMUST00000214912 628 ntBASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms