Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Snord83b-201ENSMUST00000104546 94 ntBASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Mospd4-201ENSMUST00000180618 576 ntBASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm37489-201ENSMUST00000191883 159 ntBASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap1Q8BTW8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm13342-201ENSMUST00000121055 207 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm38158-201ENSMUST00000194617 339 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm44364-201ENSMUST00000198368 141 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm10608-202ENSMUST00000213924 676 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm7046-201ENSMUST00000221351 977 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap1Q8BTW8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms