Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.23□□□□□ -0.29
Nup54Q8BTS4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Rubie-203ENSMUST00000227803 2430 ntBASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nup54Q8BTS4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.21□□□□□ -0.29
Nup54Q8BTS4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Gm9823-201ENSMUST00000051212 327 ntBASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup54Q8BTS4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup54Q8BTS4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Gm12502-201ENSMUST00000120197 444 ntBASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms