Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.5□□□□□ -0.41
Cpne3Q8BT60 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cpne3Q8BT60 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Pck2-205ENSMUST00000226352 2784 ntBASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.49□□□□□ -0.41
Cpne3Q8BT60 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Gm37917-201ENSMUST00000194711 392 ntBASIC12.49□□□□□ -0.41
Cpne3Q8BT60 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne3Q8BT60 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Mir6392-201ENSMUST00000184924 108 ntBASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Mir6977-201ENSMUST00000184960 64 ntBASIC12.48□□□□□ -0.41
Cpne3Q8BT60 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms