Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Gm24543-201ENSMUST00000103867 82 ntBASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Mir1897-201ENSMUST00000122581 272 ntBASIC10.63□□□□□ -0.71
Smco3Q8BQM7 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smco3Q8BQM7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Gm15393-201ENSMUST00000120499 219 ntBASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Gm45841-201ENSMUST00000207700 164 ntBASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smco3Q8BQM7 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms