Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Gm15881-201ENSMUST00000148792 942 ntBASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col16a1Q8BLX7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Gm21998-201ENSMUST00000117552 1308 ntBASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Gm22133-201ENSMUST00000102082 109 ntBASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Gm25881-201ENSMUST00000157783 103 ntBASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col16a1Q8BLX7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Gm23596-201ENSMUST00000104304 132 ntBASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Gm9022-201ENSMUST00000182482 992 ntBASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Gm5733-201ENSMUST00000190232 939 ntBASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col16a1Q8BLX7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm14760-201ENSMUST00000121831 999 ntBASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm11675-201ENSMUST00000121873 832 ntBASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm38210-201ENSMUST00000191944 809 ntBASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm37246-201ENSMUST00000192665 835 ntBASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm9463-201ENSMUST00000206707 601 ntBASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms