Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Gm4984-201ENSMUST00000115987 360 ntBASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Gm29127-201ENSMUST00000188304 517 ntBASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4bQ8BGE6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Gm11637-201ENSMUST00000120601 592 ntBASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Gm16177-201ENSMUST00000120728 718 ntBASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4bQ8BGE6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4bQ8BGE6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms