Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf38bQ80SY5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf38bQ80SY5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf38bQ80SY5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf38bQ80SY5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prpf38bQ80SY5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Gm6023-201ENSMUST00000118217 606 ntBASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Mospd4-201ENSMUST00000180618 576 ntBASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Gm37497-201ENSMUST00000195830 798 ntBASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Gm6991-201ENSMUST00000218475 1178 ntBASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Prpf38bQ80SY5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm24830-201ENSMUST00000102024 166 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm12616-201ENSMUST00000118594 382 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm11439-201ENSMUST00000118598 409 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm12624-201ENSMUST00000177615 382 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm25890-201ENSMUST00000177643 165 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm12621-201ENSMUST00000177760 382 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm12615-201ENSMUST00000177970 382 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm12622-201ENSMUST00000177975 382 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm22614-201ENSMUST00000178300 165 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm12627-201ENSMUST00000178412 382 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm12625-201ENSMUST00000179122 382 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm12614-201ENSMUST00000179586 382 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm12613-201ENSMUST00000180323 382 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm45186-201ENSMUST00000206874 478 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm22042-201ENSMUST00000082989 165 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm26232-201ENSMUST00000083360 166 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm24136-201ENSMUST00000083374 165 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm26110-201ENSMUST00000083971 165 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms