Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Gm14644-201ENSMUST00000116671 647 ntBASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Gm5051-201ENSMUST00000204085 485 ntBASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx55Q6ZPL9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx55Q6ZPL9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm12314-201ENSMUST00000118104 538 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm29615-201ENSMUST00000185371 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm28224-201ENSMUST00000186078 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm29001-201ENSMUST00000186177 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm28292-201ENSMUST00000186593 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm28101-201ENSMUST00000187608 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm29076-201ENSMUST00000187689 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm28302-201ENSMUST00000187931 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm28646-201ENSMUST00000188220 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm28205-201ENSMUST00000189177 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm29032-201ENSMUST00000189797 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm28695-201ENSMUST00000190300 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Gm37448-201ENSMUST00000192795 697 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx55Q6ZPL9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms