Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Dupd1-202ENSMUST00000224735 548 ntBASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf220Q6PDX6 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Gm43474-201ENSMUST00000196415 774 ntBASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Gm16476-201ENSMUST00000221544 139 ntBASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf220Q6PDX6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf220Q6PDX6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms