Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Pck2-205ENSMUST00000226352 2784 ntBASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt39Q6IFX4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.28□□□□□ -0.12
Krt39Q6IFX4 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt39Q6IFX4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Krt39Q6IFX4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt39Q6IFX4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.27□□□□□ -0.12
Krt39Q6IFX4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt39Q6IFX4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt39Q6IFX4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt39Q6IFX4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt39Q6IFX4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt39Q6IFX4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt39Q6IFX4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Gm14350-201ENSMUST00000116642 640 ntBASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Gm28631-201ENSMUST00000190740 334 ntBASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt39Q6IFX4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms