Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scube3Q66PY1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.67□□□□□ -0.22
Scube3Q66PY1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.67□□□□□ -0.22
Scube3Q66PY1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Gm22923-201ENSMUST00000174952 110 ntBASIC13.67□□□□□ -0.22
Scube3Q66PY1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.67□□□□□ -0.22
Scube3Q66PY1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.67□□□□□ -0.22
Scube3Q66PY1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.67□□□□□ -0.22
Scube3Q66PY1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.67□□□□□ -0.22
Scube3Q66PY1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scube3Q66PY1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.66□□□□□ -0.22
Scube3Q66PY1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.66□□□□□ -0.22
Scube3Q66PY1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.66□□□□□ -0.22
Scube3Q66PY1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm17208-201ENSMUST00000168388 535 ntBASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm45331-201ENSMUST00000209868 554 ntBASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm19163-201ENSMUST00000223313 780 ntBASIC13.66□□□□□ -0.22
Scube3Q66PY1 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.66□□□□□ -0.22
Scube3Q66PY1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.66□□□□□ -0.22
Scube3Q66PY1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scube3Q66PY1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms