Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
AtmQ62388 Gm4726-201ENSMUST00000135604 736 ntBASIC11.92□□□□□ -0.5
AtmQ62388 Gm6019-201ENSMUST00000148369 736 ntBASIC11.92□□□□□ -0.5
AtmQ62388 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.92□□□□□ -0.5
AtmQ62388 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AtmQ62388 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AtmQ62388 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AtmQ62388 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
AtmQ62388 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
AtmQ62388 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.91□□□□□ -0.5
AtmQ62388 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
AtmQ62388 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
AtmQ62388 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.91□□□□□ -0.5
AtmQ62388 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
AtmQ62388 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.91□□□□□ -0.5
AtmQ62388 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.91□□□□□ -0.5
AtmQ62388 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.91□□□□□ -0.5
AtmQ62388 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.91□□□□□ -0.5
AtmQ62388 Gm45594-201ENSMUST00000211717 241 ntBASIC11.91□□□□□ -0.5
AtmQ62388 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.91□□□□□ -0.5
AtmQ62388 Gm270-201ENSMUST00000223010 976 ntBASIC11.91□□□□□ -0.5
AtmQ62388 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Gm5455-201ENSMUST00000058710 715 ntBASIC11.91□□□□□ -0.5
AtmQ62388 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
AtmQ62388 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
AtmQ62388 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
AtmQ62388 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.91□□□□□ -0.5
AtmQ62388 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
AtmQ62388 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
AtmQ62388 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
AtmQ62388 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.91□□□□□ -0.5
AtmQ62388 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AtmQ62388 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.91□□□□□ -0.5
AtmQ62388 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
AtmQ62388 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.9□□□□□ -0.5
AtmQ62388 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
AtmQ62388 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
AtmQ62388 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.9□□□□□ -0.5
AtmQ62388 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.9□□□□□ -0.5
AtmQ62388 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
AtmQ62388 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.9□□□□□ -0.5
AtmQ62388 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
AtmQ62388 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.9□□□□□ -0.5
AtmQ62388 Gm16166-201ENSMUST00000118291 787 ntBASIC11.9□□□□□ -0.5
AtmQ62388 Gm13549-201ENSMUST00000118339 796 ntBASIC11.9□□□□□ -0.5
AtmQ62388 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.9□□□□□ -0.5
AtmQ62388 Gm16296-201ENSMUST00000159905 325 ntBASIC11.9□□□□□ -0.5
AtmQ62388 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
AtmQ62388 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AtmQ62388 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
AtmQ62388 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
AtmQ62388 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
AtmQ62388 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.9□□□□□ -0.51
AtmQ62388 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
AtmQ62388 Gm22877-201ENSMUST00000175451 105 ntBASIC11.9□□□□□ -0.51
AtmQ62388 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
AtmQ62388 Mir8115-201ENSMUST00000184992 119 ntBASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms