Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Ss18Q62280 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Ss18Q62280 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Ss18Q62280 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Ss18Q62280 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.55□□□□□ -0.88
Ss18Q62280 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ss18Q62280 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.55□□□□□ -0.88
Ss18Q62280 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Ss18Q62280 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Ss18Q62280 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Ss18Q62280 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.55□□□□□ -0.88
Ss18Q62280 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ss18Q62280 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ss18Q62280 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Ss18Q62280 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.54□□□□□ -0.88
Ss18Q62280 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.54□□□□□ -0.88
Ss18Q62280 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Ss18Q62280 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.54□□□□□ -0.88
Ss18Q62280 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Ss18Q62280 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.54□□□□□ -0.88
Ss18Q62280 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.54□□□□□ -0.88
Ss18Q62280 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.54□□□□□ -0.88
Ss18Q62280 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Gm5279-201ENSMUST00000199575 745 ntBASIC9.54□□□□□ -0.88
Ss18Q62280 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.54□□□□□ -0.88
Ss18Q62280 Gm45841-201ENSMUST00000207700 164 ntBASIC9.54□□□□□ -0.88
Ss18Q62280 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.54□□□□□ -0.88
Ss18Q62280 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.54□□□□□ -0.88
Ss18Q62280 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Gm24447-201ENSMUST00000083977 338 ntBASIC9.54□□□□□ -0.88
Ss18Q62280 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.54□□□□□ -0.88
Ss18Q62280 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.54□□□□□ -0.88
Ss18Q62280 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Ss18Q62280 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC9.54□□□□□ -0.88
Ss18Q62280 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.54□□□□□ -0.88
Ss18Q62280 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.54□□□□□ -0.88
Ss18Q62280 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ss18Q62280 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Ss18Q62280 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.53□□□□□ -0.88
Ss18Q62280 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.53□□□□□ -0.88
Ss18Q62280 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ss18Q62280 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Ss18Q62280 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.53□□□□□ -0.88
Ss18Q62280 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Ss18Q62280 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ss18Q62280 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Ss18Q62280 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ss18Q62280 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms