Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.25■□□□□ 0.03
Ctr9Q62018 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ctr9Q62018 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Ctr9Q62018 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.25■□□□□ 0.03
Ctr9Q62018 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.25■□□□□ 0.03
Ctr9Q62018 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.25■□□□□ 0.03
Ctr9Q62018 Gm18584-201ENSMUST00000203098 964 ntBASIC15.25■□□□□ 0.03
Ctr9Q62018 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.25■□□□□ 0.03
Ctr9Q62018 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.25■□□□□ 0.03
Ctr9Q62018 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.25■□□□□ 0.03
Ctr9Q62018 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.25■□□□□ 0.03
Ctr9Q62018 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ctr9Q62018 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ctr9Q62018 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Ctr9Q62018 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.24■□□□□ 0.03
Ctr9Q62018 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.24■□□□□ 0.03
Ctr9Q62018 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ctr9Q62018 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.24■□□□□ 0.03
Ctr9Q62018 Gm27516-201ENSMUST00000184237 98 ntBASIC15.24■□□□□ 0.03
Ctr9Q62018 Gm42627-201ENSMUST00000197347 224 ntBASIC15.24■□□□□ 0.03
Ctr9Q62018 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.24■□□□□ 0.03
Ctr9Q62018 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.24■□□□□ 0.03
Ctr9Q62018 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.24■□□□□ 0.03
Ctr9Q62018 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ctr9Q62018 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Ctr9Q62018 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.24■□□□□ 0.03
Ctr9Q62018 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ctr9Q62018 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ctr9Q62018 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.23■□□□□ 0.03
Ctr9Q62018 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.23■□□□□ 0.03
Ctr9Q62018 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.23■□□□□ 0.03
Ctr9Q62018 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Gm43179-201ENSMUST00000198797 275 ntBASIC15.23■□□□□ 0.03
Ctr9Q62018 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.23■□□□□ 0.03
Ctr9Q62018 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ctr9Q62018 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ctr9Q62018 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ctr9Q62018 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms