Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli3Q61602 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli3Q61602 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Gli3Q61602 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm11619-201ENSMUST00000117474 237 ntBASIC16.94■□□□□ 0.3
Gli3Q61602 Gm12036-201ENSMUST00000120008 530 ntBASIC16.94■□□□□ 0.3
Gli3Q61602 Gm7722-201ENSMUST00000120646 741 ntBASIC16.94■□□□□ 0.3
Gli3Q61602 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm23675-201ENSMUST00000157311 125 ntBASIC16.94■□□□□ 0.3
Gli3Q61602 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Gli3Q61602 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC16.94■□□□□ 0.3
Gli3Q61602 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC16.94■□□□□ 0.3
Gli3Q61602 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Gli3Q61602 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Gli3Q61602 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Gli3Q61602 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Gli3Q61602 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.94■□□□□ 0.3
Gli3Q61602 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm23255-201ENSMUST00000102244 110 ntBASIC16.94■□□□□ 0.3
Gli3Q61602 Mir744-201ENSMUST00000103261 100 ntBASIC16.94■□□□□ 0.3
Gli3Q61602 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm8815-201ENSMUST00000173809 620 ntBASIC16.94■□□□□ 0.3
Gli3Q61602 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli3Q61602 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Gli3Q61602 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.94■□□□□ 0.3
Gli3Q61602 Gm17213-201ENSMUST00000165161 1360 ntBASIC16.93■□□□□ 0.3
Gli3Q61602 Gm13910-201ENSMUST00000121752 1428 ntBASIC16.93■□□□□ 0.3
Gli3Q61602 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gli3Q61602 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.93■□□□□ 0.3
Gli3Q61602 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Gli3Q61602 Gm11511-201ENSMUST00000118146 540 ntBASIC16.93■□□□□ 0.3
Gli3Q61602 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC16.93■□□□□ 0.3
Gli3Q61602 Mir6941-201ENSMUST00000184711 59 ntBASIC16.93■□□□□ 0.3
Gli3Q61602 Gm5700-201ENSMUST00000191483 989 ntBASIC16.93■□□□□ 0.3
Gli3Q61602 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC16.93■□□□□ 0.3
Gli3Q61602 Gm5714-201ENSMUST00000197343 566 ntBASIC16.93■□□□□ 0.3
Gli3Q61602 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gli3Q61602 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC16.93■□□□□ 0.3
Gli3Q61602 Gm6390-201ENSMUST00000215034 589 ntBASIC16.93■□□□□ 0.3
Gli3Q61602 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Gli3Q61602 Gm5705-201ENSMUST00000066241 711 ntBASIC16.93■□□□□ 0.3
Gli3Q61602 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli3Q61602 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.92■□□□□ 0.3
Gli3Q61602 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.92■□□□□ 0.3
Gli3Q61602 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.92■□□□□ 0.3
Gli3Q61602 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
Gli3Q61602 Gm12906-201ENSMUST00000154610 441 ntBASIC16.92■□□□□ 0.3
Gli3Q61602 Gm6644-201ENSMUST00000186507 951 ntBASIC16.92■□□□□ 0.3
Gli3Q61602 Gm18801-201ENSMUST00000186616 536 ntBASIC16.92■□□□□ 0.3
Gli3Q61602 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC16.92■□□□□ 0.3
Gli3Q61602 Gm35960-201ENSMUST00000202712 767 ntBASIC16.92■□□□□ 0.3
Gli3Q61602 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC16.92■□□□□ 0.3
Gli3Q61602 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC16.92■□□□□ 0.3
Gli3Q61602 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC16.92■□□□□ 0.3
Gli3Q61602 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.92■□□□□ 0.3
Gli3Q61602 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli3Q61602 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.91■□□□□ 0.3
Gli3Q61602 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli3Q61602 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms