Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Gm12502-201ENSMUST00000120197 444 ntBASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Gm11793-201ENSMUST00000120433 981 ntBASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Gm23363-201ENSMUST00000175024 79 ntBASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Gm38092-201ENSMUST00000195600 653 ntBASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Gm45930-201ENSMUST00000221330 292 ntBASIC15.5■□□□□ 0.07
Vps54Q5SPW0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Gm7399-201ENSMUST00000032395 858 ntBASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Gm18041-201ENSMUST00000218210 618 ntBASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.49■□□□□ 0.07
Vps54Q5SPW0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Gm45331-201ENSMUST00000209868 554 ntBASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Gm6013-201ENSMUST00000212264 699 ntBASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Vps54Q5SPW0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Gm6023-201ENSMUST00000118217 606 ntBASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Gm27501-201ENSMUST00000183599 107 ntBASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Mir8109-201ENSMUST00000184375 117 ntBASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps54Q5SPW0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms