Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 CT030684.1-201ENSMUST00000227292 914 ntBASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Mzt1-203ENSMUST00000227948 952 ntBASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gm6973-201ENSMUST00000117080 721 ntBASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Rpph1-201ENSMUST00000175096 319 ntBASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gm7461-201ENSMUST00000058918 827 ntBASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3-3Q5R1C3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3-3Q5R1C3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms