Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Gm13408-201ENSMUST00000119822 798 ntBASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Gm13935-201ENSMUST00000121859 798 ntBASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Gm20392-201ENSMUST00000173047 701 ntBASIC22.38■■□□□ 1.17
Trim41Q5NCC3 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Gm8365-201ENSMUST00000197334 648 ntBASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Gm9555-201ENSMUST00000200908 583 ntBASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Gm37737-201ENSMUST00000195013 1638 ntBASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Gm5989-201ENSMUST00000096092 2077 ntBASIC22.37■■□□□ 1.17
Trim41Q5NCC3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim41Q5NCC3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Gm38391-201ENSMUST00000191720 4069 ntBASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Gm6992-201ENSMUST00000217973 1607 ntBASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Gm25214-201ENSMUST00000104573 129 ntBASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Gm8908-201ENSMUST00000121633 1024 ntBASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Gm10179-201ENSMUST00000086233 688 ntBASIC22.36■■□□□ 1.17
Trim41Q5NCC3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim41Q5NCC3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Gm9025-201ENSMUST00000122415 1575 ntBASIC22.35■■□□□ 1.17
Trim41Q5NCC3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Gm23270-201ENSMUST00000104055 131 ntBASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Gm14921-201ENSMUST00000118643 908 ntBASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Gm4760-201ENSMUST00000119663 1030 ntBASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Gm5597-201ENSMUST00000182353 1193 ntBASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 AC154849.4-201ENSMUST00000224868 365 ntBASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Gm22058-201ENSMUST00000083393 310 ntBASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Gm45779-201ENSMUST00000212189 4064 ntBASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim41Q5NCC3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms