Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Mir686-201ENSMUST00000102174 109 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Gm28693-202ENSMUST00000190758 331 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Gm7287-201ENSMUST00000205267 602 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Brf2Q3UAW9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms