Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88bQ3TYP4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm13461-201ENSMUST00000120980 662 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm17208-201ENSMUST00000168388 535 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm38317-201ENSMUST00000195564 343 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm44967-201ENSMUST00000207047 631 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88bQ3TYP4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Gm13665-201ENSMUST00000120830 528 ntBASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Gm13316-201ENSMUST00000140537 691 ntBASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Tmem88bQ3TYP4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms