Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm2420-202ENSMUST00000202224 2249 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm14052-201ENSMUST00000121434 1031 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Mir1905-201ENSMUST00000122779 82 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm8343-201ENSMUST00000182705 994 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm27444-201ENSMUST00000184157 137 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm14752-201ENSMUST00000120719 2075 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Mir704-201ENSMUST00000102106 77 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm7082-201ENSMUST00000209880 969 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm18621-201ENSMUST00000222677 679 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm5071-201ENSMUST00000104922 1035 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm37014-201ENSMUST00000194723 2253 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm24934-201ENSMUST00000103764 111 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 AC124613.1-201ENSMUST00000198711 88 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm7242-201ENSMUST00000221134 705 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Gm5292-201ENSMUST00000073317 580 ntBASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC6.62□□□□□ -1.35
Ush2AQ2QI47 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Gm23745-201ENSMUST00000104230 125 ntBASIC6.61□□□□□ -1.35
Ush2AQ2QI47 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms