Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptchd3Q0EEE2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm27772-201ENSMUST00000184900 187 ntBASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm44855-201ENSMUST00000205725 362 ntBASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gm6218-201ENSMUST00000219812 628 ntBASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ptchd3Q0EEE2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Gm42612-201ENSMUST00000197986 623 ntBASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Gm43170-201ENSMUST00000199827 612 ntBASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ptchd3Q0EEE2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms