Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.12□□□□□ -0.31
Ebf1Q07802 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm18584-201ENSMUST00000203098 964 ntBASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm5363-201ENSMUST00000211927 938 ntBASIC13.12□□□□□ -0.31
Ebf1Q07802 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Morn2-202ENSMUST00000227729 656 ntBASIC13.12□□□□□ -0.31
Ebf1Q07802 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.11□□□□□ -0.31
Ebf1Q07802 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Ebf1Q07802 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ebf1Q07802 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ebf1Q07802 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Gm12997-201ENSMUST00000120207 640 ntBASIC13.11□□□□□ -0.31
Ebf1Q07802 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Gm26185-201ENSMUST00000157692 266 ntBASIC13.11□□□□□ -0.31
Ebf1Q07802 Mir3547-201ENSMUST00000175461 88 ntBASIC13.11□□□□□ -0.31
Ebf1Q07802 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.11□□□□□ -0.31
Ebf1Q07802 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.11□□□□□ -0.31
Ebf1Q07802 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.11□□□□□ -0.31
Ebf1Q07802 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ebf1Q07802 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ebf1Q07802 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.11□□□□□ -0.31
Ebf1Q07802 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf1Q07802 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.11□□□□□ -0.31
Ebf1Q07802 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ebf1Q07802 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ebf1Q07802 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Ebf1Q07802 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ebf1Q07802 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf1Q07802 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ebf1Q07802 Gm12363-201ENSMUST00000122250 668 ntBASIC13.1□□□□□ -0.31
Ebf1Q07802 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.1□□□□□ -0.31
Ebf1Q07802 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf1Q07802 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf1Q07802 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Ebf1Q07802 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf1Q07802 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms