Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm4803-201ENSMUST00000218729 1279 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col9a1Q05722 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm10312-201ENSMUST00000078515 489 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.83□□□□□ -0.36
Col9a1Q05722 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.83□□□□□ -0.36
Col9a1Q05722 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col9a1Q05722 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm43216-201ENSMUST00000196295 1333 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Mir466f-3-201ENSMUST00000104788 94 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm12788-201ENSMUST00000119090 308 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm12403-201ENSMUST00000121384 959 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Mir1956-201ENSMUST00000157748 65 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm23776-201ENSMUST00000158993 325 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm27627-201ENSMUST00000183644 150 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm6644-201ENSMUST00000186507 951 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm9645-201ENSMUST00000197131 792 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a1Q05722 AC147628.1-201ENSMUST00000228193 688 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Ginm1-202ENSMUST00000065124 300 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.82□□□□□ -0.36
Col9a1Q05722 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Col9a1Q05722 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a1Q05722 Gm42736-201ENSMUST00000200723 1353 ntBASIC12.81□□□□□ -0.36
Col9a1Q05722 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col9a1Q05722 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.81□□□□□ -0.36
Col9a1Q05722 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Col9a1Q05722 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm22985-201ENSMUST00000122754 116 ntBASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Col9a1Q05722 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm3329-201ENSMUST00000159873 556 ntBASIC12.81□□□□□ -0.36
Col9a1Q05722 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col9a1Q05722 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms