Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.91□□□□□ -0.34
Col6a2Q02788 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Col6a2Q02788 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a2Q02788 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Col6a2Q02788 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Mir1247-201ENSMUST00000116706 82 ntBASIC12.9□□□□□ -0.34
Col6a2Q02788 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Gm12502-201ENSMUST00000120197 444 ntBASIC12.9□□□□□ -0.34
Col6a2Q02788 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Gm8738-201ENSMUST00000172606 329 ntBASIC12.9□□□□□ -0.34
Col6a2Q02788 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.9□□□□□ -0.34
Col6a2Q02788 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.9□□□□□ -0.34
Col6a2Q02788 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Col6a2Q02788 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Olfr284-202ENSMUST00000206647 966 ntBASIC12.9□□□□□ -0.34
Col6a2Q02788 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a2Q02788 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col6a2Q02788 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.9□□□□□ -0.34
Col6a2Q02788 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Col6a2Q02788 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a2Q02788 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col6a2Q02788 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a2Q02788 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a2Q02788 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a2Q02788 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a2Q02788 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a2Q02788 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a2Q02788 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.89□□□□□ -0.35
Col6a2Q02788 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a2Q02788 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Gm22121-201ENSMUST00000175148 54 ntBASIC12.89□□□□□ -0.35
Col6a2Q02788 Gm29396-201ENSMUST00000185659 716 ntBASIC12.89□□□□□ -0.35
Col6a2Q02788 Gm38158-201ENSMUST00000194617 339 ntBASIC12.89□□□□□ -0.35
Col6a2Q02788 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.89□□□□□ -0.35
Col6a2Q02788 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.89□□□□□ -0.35
Col6a2Q02788 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a2Q02788 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.89□□□□□ -0.35
Col6a2Q02788 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Col6a2Q02788 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Col6a2Q02788 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a2Q02788 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.88□□□□□ -0.35
Col6a2Q02788 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col6a2Q02788 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col6a2Q02788 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Snord83b-201ENSMUST00000104546 94 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms