Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Gm16379-201ENSMUST00000161469 348 ntBASIC12.24□□□□□ -0.45
Nkx3-2P97503 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Gm8762-201ENSMUST00000193486 339 ntBASIC12.24□□□□□ -0.45
Nkx3-2P97503 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.24□□□□□ -0.45
Nkx3-2P97503 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx3-2P97503 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm15198-201ENSMUST00000117283 177 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm11978-201ENSMUST00000122315 466 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm25927-201ENSMUST00000175058 117 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm38002-201ENSMUST00000193255 180 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm7399-201ENSMUST00000032395 858 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms