Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Npas1P97459 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Npas1P97459 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.85□□□□□ -0.67
Npas1P97459 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Npas1P97459 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Gm5264-201ENSMUST00000190584 848 ntBASIC10.85□□□□□ -0.67
Npas1P97459 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Npas1P97459 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.85□□□□□ -0.67
Npas1P97459 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.85□□□□□ -0.67
Npas1P97459 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.85□□□□□ -0.67
Npas1P97459 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.85□□□□□ -0.67
Npas1P97459 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Npas1P97459 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.85□□□□□ -0.67
Npas1P97459 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Npas1P97459 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.84□□□□□ -0.67
Npas1P97459 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Npas1P97459 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Npas1P97459 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.84□□□□□ -0.67
Npas1P97459 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.84□□□□□ -0.67
Npas1P97459 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
Npas1P97459 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.84□□□□□ -0.67
Npas1P97459 AW822252-206ENSMUST00000208904 237 ntBASIC10.84□□□□□ -0.67
Npas1P97459 Shd-206ENSMUST00000225145 998 ntBASIC10.84□□□□□ -0.67
Npas1P97459 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Npas1P97459 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Npas1P97459 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.84□□□□□ -0.67
Npas1P97459 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Npas1P97459 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.84□□□□□ -0.67
Npas1P97459 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Npas1P97459 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.84□□□□□ -0.67
Npas1P97459 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Npas1P97459 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Npas1P97459 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Npas1P97459 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Npas1P97459 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Npas1P97459 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Npas1P97459 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms