Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm14193-201ENSMUST00000105067 153 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm12684-201ENSMUST00000118675 999 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Gm5380-201ENSMUST00000119296 2136 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC8.51□□□□□ -1.05
PrkdcP97313 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm18801-201ENSMUST00000186616 536 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Gm42430-201ENSMUST00000197209 616 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Gm35960-201ENSMUST00000202712 767 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm8342-201ENSMUST00000209839 757 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
PrkdcP97313 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm12036-201ENSMUST00000120008 530 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
PrkdcP97313 AC114645.1-201ENSMUST00000215831 187 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 AC112945.1-201ENSMUST00000226413 514 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
PrkdcP97313 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm5847-201ENSMUST00000178959 1595 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Gm18198-201ENSMUST00000204986 1551 ntBASIC8.51□□□□□ -1.05
PrkdcP97313 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC8.51□□□□□ -1.05
PrkdcP97313 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC8.51□□□□□ -1.05
PrkdcP97313 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC8.51□□□□□ -1.05
PrkdcP97313 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PrkdcP97313 Gm18210-201ENSMUST00000209001 1524 ntBASIC8.5□□□□□ -1.05
PrkdcP97313 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC8.5□□□□□ -1.05
PrkdcP97313 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
PrkdcP97313 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
PrkdcP97313 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC8.5□□□□□ -1.05
PrkdcP97313 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Gm29808-201ENSMUST00000194419 468 ntBASIC8.5□□□□□ -1.05
PrkdcP97313 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
PrkdcP97313 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC8.5□□□□□ -1.05
PrkdcP97313 Gm27956-201ENSMUST00000175604 260 ntBASIC8.5□□□□□ -1.05
PrkdcP97313 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC8.5□□□□□ -1.05
PrkdcP97313 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
PrkdcP97313 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
PrkdcP97313 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
PrkdcP97313 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Gm28386-201ENSMUST00000189147 1849 ntBASIC8.5□□□□□ -1.05
PrkdcP97313 Gm14234-201ENSMUST00000119539 845 ntBASIC8.5□□□□□ -1.05
PrkdcP97313 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
PrkdcP97313 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Gm24078-201ENSMUST00000158184 103 ntBASIC8.5□□□□□ -1.05
PrkdcP97313 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
PrkdcP97313 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
PrkdcP97313 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC8.5□□□□□ -1.05
PrkdcP97313 Gm14752-201ENSMUST00000120719 2075 ntBASIC8.5□□□□□ -1.05
PrkdcP97313 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms