Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Vgll3P85442 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vgll3P85442 Gm37593-201ENSMUST00000191669 3254 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vgll3P85442 Gm37759-201ENSMUST00000194155 3246 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Vgll3P85442 Gm7862-201ENSMUST00000121461 292 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.22□□□□□ -0.29
Vgll3P85442 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.22□□□□□ -0.29
Vgll3P85442 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44357-201ENSMUST00000195897 142 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm19658-201ENSMUST00000196231 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44367-201ENSMUST00000196836 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44350-201ENSMUST00000197197 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44390-201ENSMUST00000197533 144 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44313-201ENSMUST00000198018 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44486-201ENSMUST00000198508 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44314-201ENSMUST00000199263 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44394-201ENSMUST00000199558 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44484-201ENSMUST00000199873 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44466-201ENSMUST00000200264 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Gm44359-201ENSMUST00000200671 138 ntBASIC13.22□□□□□ -0.29
Vgll3P85442 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vgll3P85442 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.22□□□□□ -0.29
Vgll3P85442 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vgll3P85442 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vgll3P85442 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.22□□□□□ -0.29
Vgll3P85442 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vgll3P85442 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vgll3P85442 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Vgll3P85442 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.21□□□□□ -0.29
Vgll3P85442 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.21□□□□□ -0.29
Vgll3P85442 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.21□□□□□ -0.29
Vgll3P85442 Gm25745-201ENSMUST00000174945 133 ntBASIC13.21□□□□□ -0.29
Vgll3P85442 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Gm43514-201ENSMUST00000198852 424 ntBASIC13.21□□□□□ -0.29
Vgll3P85442 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Gm6443-201ENSMUST00000203599 874 ntBASIC13.21□□□□□ -0.29
Vgll3P85442 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.21□□□□□ -0.29
Vgll3P85442 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.21□□□□□ -0.29
Vgll3P85442 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vgll3P85442 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vgll3P85442 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Vgll3P85442 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Vgll3P85442 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vgll3P85442 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vgll3P85442 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Vgll3P85442 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vgll3P85442 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vgll3P85442 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.21□□□□□ -0.3
Vgll3P85442 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vgll3P85442 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Vgll3P85442 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Gm10463-202ENSMUST00000195772 2889 ntBASIC13.2□□□□□ -0.3
Vgll3P85442 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vgll3P85442 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vgll3P85442 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Vgll3P85442 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.2□□□□□ -0.3
Vgll3P85442 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vgll3P85442 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vgll3P85442 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms