Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SgcdP82347 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SgcdP82347 Gm6912-201ENSMUST00000117218 544 ntBASIC12.03□□□□□ -0.48
SgcdP82347 Gm12091-201ENSMUST00000146791 830 ntBASIC12.03□□□□□ -0.48
SgcdP82347 Gm9719-201ENSMUST00000162765 543 ntBASIC12.03□□□□□ -0.48
SgcdP82347 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcdP82347 Gm45453-201ENSMUST00000211758 853 ntBASIC12.03□□□□□ -0.48
SgcdP82347 Gm25857-201ENSMUST00000082788 129 ntBASIC12.03□□□□□ -0.48
SgcdP82347 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcdP82347 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcdP82347 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SgcdP82347 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcdP82347 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SgcdP82347 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcdP82347 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.02□□□□□ -0.48
SgcdP82347 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcdP82347 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.02□□□□□ -0.48
SgcdP82347 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcdP82347 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
SgcdP82347 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SgcdP82347 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
SgcdP82347 Gm15321-201ENSMUST00000121290 288 ntBASIC12.02□□□□□ -0.49
SgcdP82347 Mir1897-201ENSMUST00000122581 272 ntBASIC12.02□□□□□ -0.49
SgcdP82347 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Gm24694-201ENSMUST00000180054 110 ntBASIC12.02□□□□□ -0.49
SgcdP82347 Gm27663-201ENSMUST00000184839 110 ntBASIC12.02□□□□□ -0.49
SgcdP82347 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.02□□□□□ -0.49
SgcdP82347 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.02□□□□□ -0.49
SgcdP82347 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.02□□□□□ -0.49
SgcdP82347 Shd-206ENSMUST00000225145 998 ntBASIC12.02□□□□□ -0.49
SgcdP82347 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Gm20445-201ENSMUST00000061905 565 ntBASIC12.02□□□□□ -0.49
SgcdP82347 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SgcdP82347 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcdP82347 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SgcdP82347 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.01□□□□□ -0.49
SgcdP82347 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SgcdP82347 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SgcdP82347 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcdP82347 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.01□□□□□ -0.49
SgcdP82347 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.01□□□□□ -0.49
SgcdP82347 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.01□□□□□ -0.49
SgcdP82347 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms