Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ldb1P70662 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ldb1P70662 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ldb1P70662 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ldb1P70662 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.87□□□□□ -0.35
Ldb1P70662 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ldb1P70662 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ldb1P70662 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Ldb1P70662 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Ldb1P70662 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.86□□□□□ -0.35
Ldb1P70662 Gm12203-201ENSMUST00000118235 598 ntBASIC12.86□□□□□ -0.35
Ldb1P70662 Gm12209-201ENSMUST00000120089 596 ntBASIC12.86□□□□□ -0.35
Ldb1P70662 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Gm27839-201ENSMUST00000184242 106 ntBASIC12.86□□□□□ -0.35
Ldb1P70662 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Gm5035-201ENSMUST00000215581 927 ntBASIC12.86□□□□□ -0.35
Ldb1P70662 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Gm10012-201ENSMUST00000078252 192 ntBASIC12.86□□□□□ -0.35
Ldb1P70662 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.86□□□□□ -0.35
Ldb1P70662 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ldb1P70662 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.86□□□□□ -0.35
Ldb1P70662 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.86□□□□□ -0.35
Ldb1P70662 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ldb1P70662 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ldb1P70662 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.85□□□□□ -0.35
Ldb1P70662 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.85□□□□□ -0.35
Ldb1P70662 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.85□□□□□ -0.35
Ldb1P70662 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.85□□□□□ -0.35
Ldb1P70662 Gm9002-201ENSMUST00000178437 499 ntBASIC12.85□□□□□ -0.35
Ldb1P70662 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.85□□□□□ -0.35
Ldb1P70662 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Ldb1P70662 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.85□□□□□ -0.35
Ldb1P70662 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.85□□□□□ -0.35
Ldb1P70662 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.85□□□□□ -0.35
Ldb1P70662 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ldb1P70662 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Ldb1P70662 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ldb1P70662 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ldb1P70662 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ldb1P70662 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.84□□□□□ -0.35
Ldb1P70662 Gm8213-201ENSMUST00000118191 441 ntBASIC12.84□□□□□ -0.35
Ldb1P70662 Gm11424-201ENSMUST00000121929 829 ntBASIC12.84□□□□□ -0.35
Ldb1P70662 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ldb1P70662 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms