Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.8□□□□□ -0.68
Pdlim4P70271 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm14350-201ENSMUST00000116642 640 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pdlim4P70271 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm8652-201ENSMUST00000181363 964 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm27847-201ENSMUST00000183711 107 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm27375-201ENSMUST00000183799 107 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Mir7221-201ENSMUST00000184009 72 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.79□□□□□ -0.68
Pdlim4P70271 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Pdlim4P70271 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.79□□□□□ -0.68
Pdlim4P70271 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdlim4P70271 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.78□□□□□ -0.68
Pdlim4P70271 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pdlim4P70271 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Gm8213-201ENSMUST00000118191 441 ntBASIC10.78□□□□□ -0.68
Pdlim4P70271 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Gm18187-201ENSMUST00000196476 984 ntBASIC10.78□□□□□ -0.68
Pdlim4P70271 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms