Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Six5P70178 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Six5P70178 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Six5P70178 Gm6091-201ENSMUST00000098307 165 ntBASIC12.11□□□□□ -0.47
Six5P70178 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Six5P70178 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.11□□□□□ -0.47
Six5P70178 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.11□□□□□ -0.47
Six5P70178 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Six5P70178 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Six5P70178 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six5P70178 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Six5P70178 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.1□□□□□ -0.47
Six5P70178 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Six5P70178 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six5P70178 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.1□□□□□ -0.47
Six5P70178 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six5P70178 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six5P70178 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Gm16479-201ENSMUST00000121706 932 ntBASIC12.1□□□□□ -0.47
Six5P70178 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.1□□□□□ -0.47
Six5P70178 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.1□□□□□ -0.47
Six5P70178 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.1□□□□□ -0.47
Six5P70178 Gm17150-201ENSMUST00000165577 381 ntBASIC12.1□□□□□ -0.47
Six5P70178 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.1□□□□□ -0.47
Six5P70178 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Six5P70178 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.1□□□□□ -0.47
Six5P70178 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Six5P70178 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Six5P70178 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.1□□□□□ -0.47
Six5P70178 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Six5P70178 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six5P70178 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Six5P70178 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.09□□□□□ -0.47
Six5P70178 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Six5P70178 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Six5P70178 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Six5P70178 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Six5P70178 Gm4984-201ENSMUST00000115987 360 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms