Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.42□□□□□ -0.58
Sec61a1P61620 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.41□□□□□ -0.58
Sec61a1P61620 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.41□□□□□ -0.58
Sec61a1P61620 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.41□□□□□ -0.58
Sec61a1P61620 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sec61a1P61620 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Gm45384-201ENSMUST00000210451 277 ntBASIC11.41□□□□□ -0.58
Sec61a1P61620 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.41□□□□□ -0.58
Sec61a1P61620 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sec61a1P61620 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.41□□□□□ -0.58
Sec61a1P61620 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sec61a1P61620 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sec61a1P61620 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sec61a1P61620 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sec61a1P61620 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a1P61620 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.4□□□□□ -0.58
Sec61a1P61620 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.4□□□□□ -0.58
Sec61a1P61620 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.4□□□□□ -0.58
Sec61a1P61620 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.4□□□□□ -0.58
Sec61a1P61620 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a1P61620 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sec61a1P61620 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sec61a1P61620 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sec61a1P61620 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.4□□□□□ -0.59
Sec61a1P61620 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sec61a1P61620 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.4□□□□□ -0.59
Sec61a1P61620 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61a1P61620 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Sec61a1P61620 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms