Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.22□□□□□ -0.45
Nup43P59235 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup43P59235 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.21□□□□□ -0.45
Nup43P59235 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Gm13226-201ENSMUST00000117838 404 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.21□□□□□ -0.45
Nup43P59235 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.21□□□□□ -0.45
Nup43P59235 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.21□□□□□ -0.45
Nup43P59235 Mir1982-201ENSMUST00000157368 74 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Gm26927-201ENSMUST00000182385 965 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Gm27682-201ENSMUST00000183930 110 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Gm45784-201ENSMUST00000188360 142 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Gm37042-201ENSMUST00000193816 581 ntBASIC12.21□□□□□ -0.45
Nup43P59235 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Gm19163-201ENSMUST00000223313 780 ntBASIC12.21□□□□□ -0.45
Nup43P59235 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nup43P59235 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.21□□□□□ -0.45
Nup43P59235 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup43P59235 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup43P59235 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup43P59235 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.21□□□□□ -0.46
Nup43P59235 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Nup43P59235 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.21□□□□□ -0.46
Nup43P59235 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup43P59235 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.21□□□□□ -0.46
Nup43P59235 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.2□□□□□ -0.46
Nup43P59235 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Nup43P59235 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.2□□□□□ -0.46
Nup43P59235 Gm14127-201ENSMUST00000117906 678 ntBASIC12.2□□□□□ -0.46
Nup43P59235 Gm14660-201ENSMUST00000119809 575 ntBASIC12.2□□□□□ -0.46
Nup43P59235 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 Gm4768-201ENSMUST00000206199 686 ntBASIC12.2□□□□□ -0.46
Nup43P59235 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.2□□□□□ -0.46
Nup43P59235 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nup43P59235 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.2□□□□□ -0.46
Nup43P59235 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup43P59235 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms