Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33bP59016 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33bP59016 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Vps33bP59016 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.11■□□□□ 0.17
Vps33bP59016 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Vps33bP59016 Gm13809-201ENSMUST00000117921 597 ntBASIC16.11■□□□□ 0.17
Vps33bP59016 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC16.11■□□□□ 0.17
Vps33bP59016 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC16.11■□□□□ 0.17
Vps33bP59016 Cd63-ps-202ENSMUST00000154992 717 ntBASIC16.11■□□□□ 0.17
Vps33bP59016 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Vps33bP59016 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Gm28324-201ENSMUST00000187913 264 ntBASIC16.11■□□□□ 0.17
Vps33bP59016 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC16.11■□□□□ 0.17
Vps33bP59016 Gm34023-201ENSMUST00000195539 217 ntBASIC16.11■□□□□ 0.17
Vps33bP59016 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vps33bP59016 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Gm9387-201ENSMUST00000098624 1320 ntBASIC16.11■□□□□ 0.17
Vps33bP59016 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Vps33bP59016 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.11■□□□□ 0.17
Vps33bP59016 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33bP59016 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Vps33bP59016 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.1■□□□□ 0.17
Vps33bP59016 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps33bP59016 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Vps33bP59016 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Vps33bP59016 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Vps33bP59016 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vps33bP59016 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Gm24934-201ENSMUST00000103764 111 ntBASIC16.1■□□□□ 0.17
Vps33bP59016 Gm12857-201ENSMUST00000117678 592 ntBASIC16.1■□□□□ 0.17
Vps33bP59016 Gm11340-201ENSMUST00000119226 412 ntBASIC16.1■□□□□ 0.17
Vps33bP59016 Gm14585-201ENSMUST00000120713 634 ntBASIC16.1■□□□□ 0.17
Vps33bP59016 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Vps33bP59016 Mir7076-201ENSMUST00000183519 74 ntBASIC16.1■□□□□ 0.17
Vps33bP59016 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps33bP59016 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Vps33bP59016 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.1■□□□□ 0.17
Vps33bP59016 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Vps33bP59016 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vps33bP59016 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.1■□□□□ 0.17
Vps33bP59016 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vps33bP59016 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33bP59016 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33bP59016 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33bP59016 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.09■□□□□ 0.17
Vps33bP59016 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33bP59016 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vps33bP59016 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33bP59016 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33bP59016 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Vps33bP59016 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33bP59016 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33bP59016 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33bP59016 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33bP59016 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms